Use Avizo – examples

Contents:

• Setup Flexnet license server for Avizo
  • Download and extract software
  • Install the server on Mac OS 10.8.5
  • Configure the server
• Measure surface in Avizo
  • Step 1: measure the original materials
  • Step 2: merge labels and measure again
• Measure surface in Avizo - Large data
  • Step 1: clean the labels
  • Step 2: Generate surface
  • Step 3: Measure Surface
  • Measurement Results:
  • Visualize Clay-void surface
• Clean up noisy thresholded binary data
  • Step 1: de-noise original dataset
  • Step 2: threshold and de-noise binary dataset
• Auto skeleton
  • Crop data
  • Remove noise surrounding the sample
  • Volume rendering
  • Segment the cracks
  • Auto Skeleton
  • Thickness histogram
  • Avizo network
• Register 3D volumes
  • Data description
  • Prepare data
  • Visualization
  • Manual registration
  • Auto registration
  • Landmark-based registration